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GANAB glucosidase II alpha subunit [ Orcinus orca (killer whale) ]

Gene ID: 101280187, updated on 8-Mar-2024

Summary

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Gene symbol
GANAB
Gene description
glucosidase II alpha subunit
See related
EnsemblRapid:ENSOORG00010021799
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See GANAB in Genome Data Viewer
Location:
chromosome: 8
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 8 NC_064566.1 (9087519..9104797)

Chromosome 8 - NC_064566.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C11orf98 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene citrate synthase lysine methyltransferase Neighboring gene integrator complex subunit 5 Neighboring gene U6 spliceosomal RNA Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene retinal outer segment membrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064566.1 Chromosome 8 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucan 1,3-alpha-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase AB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064566.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    9087519..9104797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049713370.1 → XP_049569327.1  neutral alpha-glucosidase AB isoform X1

    Related
    ENSOORP00010028936.1, ENSOORT00010032668.1

  2. XM_049713371.1 → XP_049569328.1  neutral alpha-glucosidase AB isoform X2

    Related
    ENSOORP00010028939.1, ENSOORT00010032671.1
Nucleotide Protein
Heading Accession and Version

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