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GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 [ Orcinus orca (killer whale) ]

Gene ID: 101279839, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT7
Gene description
polypeptide N-acetylgalactosaminyltransferase 7
See related
EnsemblRapid:ENSOORG00010005662
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See GALNT7 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 6 NC_064564.1 (10699756..10816140)

Chromosome 6 - NC_064564.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125964780 Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC117196155 Neighboring gene high mobility group box 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064564.1 Chromosome 6 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064564.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    10699756..10816140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033403592.2 → XP_033259483.1  N-acetylgalactosaminyltransferase 7 isoform X3

    Conserved Domains (2) summary
    cd02510
    Location:170 → 478
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:494 → 609
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_049711357.1 → XP_049567314.1  N-acetylgalactosaminyltransferase 7 isoform X4

  3. XM_033403589.2 → XP_033259480.1  N-acetylgalactosaminyltransferase 7 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_004278677.3 → XP_004278725.1  N-acetylgalactosaminyltransferase 7 isoform X1

    Related
    ENSOORP00010006637.1, ENSOORT00010008157.1
    Conserved Domains (4) summary
    cd02510
    Location:210 → 518
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:210 → 318
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:535 → 651
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:534 → 649
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  5. XM_033403593.2 → XP_033259484.1  N-acetylgalactosaminyltransferase 7 isoform X5

    Conserved Domains (2) summary
    cd02510
    Location:210 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:473 → 588
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

RNA

  1. XR_004476234.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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