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PIGU phosphatidylinositol glycan anchor biosynthesis class U [ Orcinus orca (killer whale) ]

Gene ID: 101279723, updated on 8-Mar-2024

Summary

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Gene symbol
PIGU
Gene description
phosphatidylinositol glycan anchor biosynthesis class U
See related
EnsemblRapid:ENSOORG00010014485
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See PIGU in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 16 NC_064574.1 (25070835..25197438)

Chromosome 16 - NC_064574.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial-like Neighboring gene nuclear receptor coactivator 6 Neighboring gene ATP synthase subunit d, mitochondrial-like Neighboring gene tumor protein p53 inducible nuclear protein 2 Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene microtubule associated protein 1 light chain 3 alpha Neighboring gene dynein light chain roadblock-type 1 Neighboring gene peroxisomal membrane protein 4 Neighboring gene itchy E3 ubiquitin protein ligase Neighboring gene S-phase kinase-associated protein 1-like Neighboring gene adenosylhomocysteinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064574.1 Chromosome 16 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol glycan anchor biosynthesis class U protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064574.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    25070835..25197438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004272747.2 → XP_004272795.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X3

    Related
    ENSOORP00010018733.1, ENSOORT00010021531.1
    Conserved Domains (1) summary
    pfam06728
    Location:20 → 394
    PIG-U; GPI transamidase subunit PIG-U

  2. XM_033433533.2 → XP_033289424.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X7

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 308
    PIG-U; GPI transamidase subunit PIG-U

  3. XM_033433535.2 → XP_033289426.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X8

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 308
    PIG-U; GPI transamidase subunit PIG-U

  4. XM_033433520.2 → XP_033289411.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X2

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 394
    PIG-U; GPI transamidase subunit PIG-U

  5. XM_033433524.2 → XP_033289415.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X5

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 394
    PIG-U; GPI transamidase subunit PIG-U

  6. XM_033433529.2 → XP_033289420.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X6

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 309
    PIG-U; GPI transamidase subunit PIG-U

  7. XM_033433518.2 → XP_033289409.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X1

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 308
    PIG-U; GPI transamidase subunit PIG-U

  8. XM_033433530.2 → XP_033289421.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X6

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 309
    PIG-U; GPI transamidase subunit PIG-U

  9. XM_033433528.2 → XP_033289419.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X6

    Conserved Domains (1) summary
    pfam06728
    Location:20 → 309
    PIG-U; GPI transamidase subunit PIG-U

  10. XM_033433523.2 → XP_033289414.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X4

    Conserved Domains (1) summary
    pfam06728
    Location:1 → 224
    PIG-U; GPI transamidase subunit PIG-U

  11. XM_049698926.1 → XP_049554883.1  phosphatidylinositol glycan anchor biosynthesis class U protein isoform X4

Nucleotide Protein
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