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MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 [ Orcinus orca (killer whale) ]

Gene ID: 101279713, updated on 8-Mar-2024

Summary

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Gene symbol
MDGA2
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 2
See related
EnsemblRapid:ENSOORG00010014659
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See MDGA2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 2 NC_064560.1 (148495681..149326421, complement)

Chromosome 2 - NC_064560.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125963685 Neighboring gene uncharacterized LOC125963682 Neighboring gene ribosomal protein L10 like Neighboring gene adenosine 5'-monophosphoramidase HINT1-like Neighboring gene RING finger and CHY zinc finger domain-containing protein 1-like Neighboring gene polycomb group RING finger protein 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064560.1 Chromosome 2 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064560.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    148495681..149326421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004270015.4 → XP_004270063.2  MAM domain-containing glycosylphosphatidylinositol anchor protein 2

    Related
    ENSOORP00010018999.1, ENSOORT00010021802.1
Nucleotide Protein
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Gene LinkOut

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