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A4GNT alpha-1,4-N-acetylglucosaminyltransferase [ Orcinus orca (killer whale) ]

Gene ID: 101279663, updated on 8-Mar-2024

Summary

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Gene symbol
A4GNT
Gene description
alpha-1,4-N-acetylglucosaminyltransferase
See related
EnsemblRapid:ENSOORG00010001058
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See A4GNT in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 5 NC_064563.1 (30852339..30856551)

Chromosome 5 - NC_064563.1Genomic Context describing neighboring genes Neighboring gene armadillo repeat containing 8 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene debranching RNA lariats 1 Neighboring gene DAZ interacting zinc finger protein 1 like Neighboring gene claudin 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064563.1 Chromosome 5 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,4-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064563.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    30852339..30856551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004278951.1 → XP_004278999.1  alpha-1,4-N-acetylglucosaminyltransferase

    Related
    ENSOORP00010000849.1, ENSOORT00010001360.1
    Conserved Domains (2) summary
    pfam04572
    Location:202 → 322
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:65 → 183
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
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