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FKRP fukutin related protein [ Orcinus orca (killer whale) ]

Gene ID: 101278326, updated on 8-Mar-2024

Summary

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Gene symbol
FKRP
Gene description
fukutin related protein
See related
EnsemblRapid:ENSOORG00010013202
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See FKRP in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (50239811..50254657)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125962656 Neighboring gene uncharacterized LOC125962655 Neighboring gene protein kinase D2 Neighboring gene striatin 4 Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 1 member 5 Neighboring gene adaptor related protein complex 2 subunit sigma 1 Neighboring gene Rho GTPase activating protein 35

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol 5-phosphate transferase FKRP

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    50239811..50254657
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049702879.1 → XP_049558836.1  ribitol 5-phosphate transferase FKRP

    Related
    ENSOORP00010016963.1, ENSOORT00010019553.1

  2. XM_049702877.1 → XP_049558834.1  ribitol 5-phosphate transferase FKRP

  3. XM_049702878.1 → XP_049558835.1  ribitol 5-phosphate transferase FKRP

  4. XM_033430659.2 → XP_033286550.1  ribitol 5-phosphate transferase FKRP

    Conserved Domains (1) summary
    cl01378
    Location:334 → 371
    LicD; LicD family

  5. XM_033430661.2 → XP_033286552.1  ribitol 5-phosphate transferase FKRP

    Conserved Domains (1) summary
    cl01378
    Location:334 → 371
    LicD; LicD family

  6. XM_033430660.2 → XP_033286551.1  ribitol 5-phosphate transferase FKRP

    Conserved Domains (1) summary
    cl01378
    Location:334 → 371
    LicD; LicD family

  7. XM_033430662.2 → XP_033286553.1  ribitol 5-phosphate transferase FKRP

    Conserved Domains (1) summary
    cl01378
    Location:334 → 371
    LicD; LicD family

RNA

  1. XR_007474091.1 RNA Sequence

  2. XR_004483896.2 RNA Sequence

  3. XR_004483895.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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