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LYG2 lysozyme g2 [ Orcinus orca (killer whale) ]

Gene ID: 101277938, updated on 8-Mar-2024

Summary

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Gene symbol
LYG2
Gene description
lysozyme g2
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See LYG2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 13 NC_064571.1 (7465845..7471825)

Chromosome 13 - NC_064571.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial ribosomal protein L30 Neighboring gene lysozyme g1 Neighboring gene microtubule interacting and trafficking domain containing 1 Neighboring gene lipoyltransferase 1 Neighboring gene chromosome 13 C2orf15 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064571.1 Chromosome 13 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidoglycan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: lysozyme g-like protein 2
Names
lysozyme G-like 2
lysozyme g-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064571.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    7465845..7471825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049696231.1 → XP_049552188.1  LOW QUALITY PROTEIN: lysozyme g-like protein 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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