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MAG myelin associated glycoprotein [ Orcinus orca (killer whale) ]

Gene ID: 101277889, updated on 8-Mar-2024

Summary

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Gene symbol
MAG
Gene description
myelin associated glycoprotein
See related
EnsemblRapid:ENSOORG00010010947
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See MAG in Genome Data Viewer
Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (43209870..43224145)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene upstream transcription factor 2, c-fos interacting Neighboring gene hepcidin antimicrobial peptide Neighboring gene CD22 molecule Neighboring gene uncharacterized LOC105748813 Neighboring gene free fatty acid receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
myelin-associated glycoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    43209870..43224145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004284163.3 → XP_004284211.1  myelin-associated glycoprotein isoform X2

    Conserved Domains (5) summary
    cd05712
    Location:22 → 139
    Ig_Siglec_N; Immunoglobulin (Ig) domain at the N terminus of Siglec (sialic acid-binding Ig-like lectins)
    smart00408
    Location:253 → 312
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:333 → 409
    IG_like; Immunoglobulin like
    pfam07679
    Location:240 → 322
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:141 → 223
    Ig; Immunoglobulin domain

  2. XM_049702920.1 → XP_049558877.1  myelin-associated glycoprotein isoform X1

    Related
    ENSOORP00010013783.1, ENSOORT00010016114.1

RNA

  1. XR_007474109.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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