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IRF8 interferon regulatory factor 8 [ Orcinus orca (killer whale) ]

Gene ID: 101277860, updated on 8-Mar-2024

Summary

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Gene symbol
IRF8
Gene description
interferon regulatory factor 8
See related
EnsemblRapid:ENSOORG00010008499
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See IRF8 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 20 NC_064578.1 (3224129..3246212, complement)

Chromosome 20 - NC_064578.1Genomic Context describing neighboring genes Neighboring gene forkhead box F1 Neighboring gene uncharacterized LOC125962786 Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene U6atac minor spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064578.1 Chromosome 20 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064578.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    3224129..3246212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004280077.3 → XP_004280125.1  interferon regulatory factor 8 isoform X2

    Related
    ENSOORP00010010503.1, ENSOORT00010012446.1
    Conserved Domains (2) summary
    pfam00605
    Location:9 → 113
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:203 → 381
    IRF-3; Interferon-regulatory factor 3

  2. XM_033406330.2 → XP_033262221.1  interferon regulatory factor 8 isoform X1

    Conserved Domains (2) summary
    pfam00605
    Location:9 → 113
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:204 → 382
    IRF-3; Interferon-regulatory factor 3

  3. XM_049704076.1 → XP_049560033.1  interferon regulatory factor 8 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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