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GPAA1 glycosylphosphatidylinositol anchor attachment 1 [ Orcinus orca (killer whale) ]

Gene ID: 101276985, updated on 8-Mar-2024

Summary

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Gene symbol
GPAA1
Gene description
glycosylphosphatidylinositol anchor attachment 1
See related
EnsemblRapid:ENSOORG00010004331
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See GPAA1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 17 NC_064575.1 (86842354..86846882)

Chromosome 17 - NC_064575.1Genomic Context describing neighboring genes Neighboring gene 5-oxoprolinase, ATP-hydrolysing Neighboring gene uncharacterized LOC125961751 Neighboring gene exosome component 4 Neighboring gene cytochrome c1, heme protein, mitochondrial Neighboring gene SHANK associated RH domain interactor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064575.1 Chromosome 17 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosylphosphatidylinositol anchor attachment 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064575.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    86842354..86846882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049700583.1 → XP_049556540.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

  2. XM_004265243.4 → XP_004265291.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

    Related
    ENSOORP00010005005.1, ENSOORT00010006230.1
    Conserved Domains (1) summary
    pfam04114
    Location:126 → 613
    Gaa1; Gaa1-like, GPI transamidase component
Nucleotide Protein
Heading Accession and Version

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