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ASGR2 asialoglycoprotein receptor 2 [ Orcinus orca (killer whale) ]

Gene ID: 101276830, updated on 8-Mar-2024

Summary

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Gene symbol
ASGR2
Gene description
asialoglycoprotein receptor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See ASGR2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 19 NC_064577.1 (11603316..11617989, complement)

Chromosome 19 - NC_064577.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 11 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene C-type lectin domain containing 10A Neighboring gene FUN14 domain-containing protein 2-like Neighboring gene asialoglycoprotein receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064577.1 Chromosome 19 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
asialoglycoprotein receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064577.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    11603316..11617989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033423055.2 → XP_033278946.1  asialoglycoprotein receptor 2 isoform X3

    Conserved Domains (2) summary
    cd03590
    Location:162 → 273
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:29 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  2. XM_004266948.3 → XP_004266996.1  asialoglycoprotein receptor 2 isoform X1

    Conserved Domains (2) summary
    cd03590
    Location:171 → 295
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:29 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  3. XM_033423053.2 → XP_033278944.1  asialoglycoprotein receptor 2 isoform X1

    Conserved Domains (2) summary
    cd03590
    Location:171 → 295
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:29 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  4. XM_033423052.2 → XP_033278943.1  asialoglycoprotein receptor 2 isoform X1

    Conserved Domains (2) summary
    cd03590
    Location:171 → 295
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:29 → 163
    Lectin_N; Hepatic lectin, N-terminal domain

  5. XM_033423054.2 → XP_033278945.1  asialoglycoprotein receptor 2 isoform X2

    Conserved Domains (2) summary
    cd03590
    Location:152 → 276
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
    pfam03954
    Location:16 → 144
    Lectin_N; Hepatic lectin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

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