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RGN regucalcin [ Orcinus orca (killer whale) ]

Gene ID: 101276637, updated on 8-Mar-2024

Summary

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Gene symbol
RGN
Gene description
regucalcin
See related
EnsemblRapid:ENSOORG00010017971
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See RGN in Genome Data Viewer
Location:
chromosome: X
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) X NC_064580.1 (42448576..42469582)

Chromosome X - NC_064580.1Genomic Context describing neighboring genes Neighboring gene jade family PHD finger 3 Neighboring gene olfactory receptor 2J3-like Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene NADH:ubiquinone oxidoreductase subunit B11 Neighboring gene RNA binding motif protein 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064580.1 Chromosome X Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables enzyme regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables gluconolactonase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-ascorbic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regucalcin
Names
regucalcin (senescence marker protein-30)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064580.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    42448576..42469582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033409651.2 → XP_033265542.1  regucalcin

    Related
    ENSOORP00010023628.1, ENSOORT00010026870.1
    Conserved Domains (1) summary
    pfam08450
    Location:18 → 266
    SGL; SMP-30/Gluconolaconase/LRE-like region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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