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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Orcinus orca (killer whale) ]

Gene ID: 101273684, updated on 8-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
See related
EnsemblRapid:ENSOORG00010021997
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 1 NC_064559.1 (97974892..98076423, complement)

Chromosome 1 - NC_064559.1Genomic Context describing neighboring genes Neighboring gene T-cell surface glycoprotein CD1b-2 Neighboring gene uncharacterized LOC117198322 Neighboring gene Fc receptor-like protein 2 Neighboring gene CD5 molecule like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064559.1 Chromosome 1 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064559.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    97974892..98076423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049694419.1 → XP_049550376.1  kin of IRRE-like protein 1 isoform X5

  2. XM_049694418.1 → XP_049550375.1  kin of IRRE-like protein 1 isoform X4

    Related
    ENSOORP00010029203.1, ENSOORT00010032966.1

  3. XM_033414331.2 → XP_033270222.1  kin of IRRE-like protein 1 isoform X3

    Conserved Domains (5) summary
    pfam13927
    Location:258 → 339
    Ig_3; Immunoglobulin domain
    cd00096
    Location:275 → 279
    Ig; Ig strand B [structural motif]
    cd05759
    Location:72 → 169
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:357 → 454
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:173 → 254
    Ig; Immunoglobulin domain

  4. XM_004284472.3 → XP_004284520.1  kin of IRRE-like protein 1 isoform X2

    Related
    ENSOORP00010029205.1, ENSOORT00010032968.1
    Conserved Domains (4) summary
    cd05759
    Location:138 → 219
    Ig2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 (also known as Neph2)
    cd05898
    Location:391 → 488
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    pfam13927
    Location:308 → 373
    Ig_3; Immunoglobulin domain
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain

  5. XM_033414330.2 → XP_033270221.1  kin of IRRE-like protein 1 isoform X1

    Conserved Domains (5) summary
    pfam13927
    Location:308 → 389
    Ig_3; Immunoglobulin domain
    cd00096
    Location:325 → 329
    Ig; Ig strand B [structural motif]
    cd05759
    Location:122 → 219
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:407 → 504
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
    cl11960
    Location:22 → 116
    Ig; Immunoglobulin domain
Nucleotide Protein
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