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OTOA otoancorin [ Orcinus orca (killer whale) ]

Gene ID: 101272746, updated on 8-Mar-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
See related
EnsemblRapid:ENSOORG00010009311
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: 16
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 16 NC_064574.1 (66693828..66764973)

Chromosome 16 - NC_064574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125961443 Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene immunoglobulin superfamily member 6 Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 2 Neighboring gene T-complex protein 1 subunit zeta-like Neighboring gene small nucleolar RNA SNORA22 Neighboring gene ubiquitin specific peptidase 31

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064574.1 Chromosome 16 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064574.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    66693828..66764973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004268569.3 → XP_004268617.1  otoancorin

    Related
    ENSOORP00010011543.1, ENSOORT00010013655.1
Nucleotide Protein
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