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NAGA alpha-N-acetylgalactosaminidase [ Orcinus orca (killer whale) ]

Gene ID: 101272207, updated on 8-Mar-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
See related
EnsemblRapid:ENSOORG00010020332
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See NAGA in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 11 NC_064569.1 (96093734..96103056, complement)

Chromosome 11 - NC_064569.1Genomic Context describing neighboring genes Neighboring gene septin 3 Neighboring gene WBP2 N-terminal like Neighboring gene zinc finger protein 30-like Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene single-pass membrane protein with aspartate rich tail 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064569.1 Chromosome 11 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064569.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    96093734..96103056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033405167.2 → XP_033261058.1  alpha-N-acetylgalactosaminidase isoform X2

    Conserved Domains (2) summary
    pfam17450
    Location:311 → 367
    Melibiase_2_C; Alpha galactosidase A C-terminal beta sandwich domain
    cl38930
    Location:26 → 308
    AmyAc_family; Alpha amylase catalytic domain family

  2. XM_004279545.4 → XP_004279593.1  alpha-N-acetylgalactosaminidase isoform X1

    Related
    ENSOORP00010026971.1, ENSOORT00010030497.1
    Conserved Domains (1) summary
    cl07893
    Location:25 → 394
    AmyAc_family; Alpha amylase catalytic domain family

  3. XM_049694255.1 → XP_049550212.1  alpha-N-acetylgalactosaminidase isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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