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GBA2 glucosylceramidase beta 2 [ Orcinus orca (killer whale) ]

Gene ID: 101271926, updated on 8-Mar-2024

Summary

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Gene symbol
GBA2
Gene description
glucosylceramidase beta 2
See related
EnsemblRapid:ENSOORG00010015918
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See GBA2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 6 NC_064564.1 (84082412..84093125, complement)

Chromosome 6 - NC_064564.1Genomic Context describing neighboring genes Neighboring gene tropomyosin 2 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene talin 1 Neighboring gene cAMP responsive element binding protein 3 Neighboring gene RGP1 homolog, RAB6A GEF complex partner 1 Neighboring gene microseminoprotein, prostate associated Neighboring gene natriuretic peptide receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064564.1 Chromosome 6 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-lysosomal glucosylceramidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064564.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    84082412..84093125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004271412.4 → XP_004271460.2  non-lysosomal glucosylceramidase isoform X1

    Related
    ENSOORP00010020705.1, ENSOORT00010023665.1

  2. XM_033431084.2 → XP_033286975.1  non-lysosomal glucosylceramidase isoform X2

    Conserved Domains (2) summary
    pfam04685
    Location:513 → 759
    DUF608; Glycosyl-hydrolase family 116, catalytic region
    pfam12215
    Location:158 → 447
    Glyco_hydr_116N; beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
Nucleotide Protein
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