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LOC101267327 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [ Solanum lycopersicum (tomato) ]

Gene ID: 101267327, updated on 1-Nov-2024

Summary

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Gene symbol
LOC101267327
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101267327 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 7 NC_090806.1 (65864203..65870903)
103 previous assembly SL3.0 (GCF_000188115.4) 7 NC_015444.3 (63511293..63517866)

Chromosome 7 - NC_090806.1Genomic Context describing neighboring genes Neighboring gene probable WRKY transcription factor 65 Neighboring gene Rab11 GTPase Neighboring gene pentatricopeptide repeat-containing protein At2g41080 Neighboring gene ATP-dependent zinc metalloprotease FTSH 2, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables trehalose-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLM_r2.1 Primary Assembly

Genomic

  1. NC_090806.1 Reference SLM_r2.1 Primary Assembly

    Range
    65864203..65870903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004243220.5 → XP_004243268.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

    UniProtKB/TrEMBL
    A0A3Q7I9T5
    Conserved Domains (3) summary
    cd03788
    Location:62 → 545
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN02205
    Location:1 → 848
    PLN02205; alpha,alpha-trehalose-phosphate synthase [UDP-forming]
    pfam02358
    Location:595 → 830
    Trehalose_PPase; Trehalose-phosphatase
Nucleotide Protein
Heading Accession and Version

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