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LOC101267312 glucomannan 4-beta-mannosyltransferase 9-like [ Solanum lycopersicum (tomato) ]

Gene ID: 101267312, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101267312
Gene description
glucomannan 4-beta-mannosyltransferase 9-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101267312 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 5 NC_015442.3 (65911219..65915926, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 5 NC_015442.2 (65062782..65067430, complement)

Chromosome 5 - NC_015442.3Genomic Context describing neighboring genes Neighboring gene cytochrome P450 7719 Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene glycosyltransferase family protein 64 protein C5-like Neighboring gene uncharacterized protein SYNPCC7002_A1590

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucomannan 4-beta-mannosyltransferase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015442.3 Reference SL3.0 Primary Assembly

    Range
    65911219..65915926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004239667.4 → XP_004239715.2  glucomannan 4-beta-mannosyltransferase 9-like

    UniProtKB/TrEMBL
    K4C2L7
    Conserved Domains (2) summary
    cd06437
    Location:87 → 323
    CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
    pfam13641
    Location:87 → 322
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein
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