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LOC101263915 O-fucosyltransferase 34 [ Solanum lycopersicum (tomato) ]

Gene ID: 101263915, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101263915
Gene description
O-fucosyltransferase 34
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101263915 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 6 NC_015443.3 (43245687..43249559, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 6 NC_015443.2 (43128980..43132834, complement)

Chromosome 6 - NC_015443.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101264529 Neighboring gene transcription factor BIM1 Neighboring gene dof zinc finger protein DOF5.4 Neighboring gene D-aminoacyl-tRNA deacylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
O-fucosyltransferase 34

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015443.3 Reference SL3.0 Primary Assembly

    Range
    43245687..43249559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004241566.4 → XP_004241614.1  O-fucosyltransferase 34

    UniProtKB/TrEMBL
    A0A3Q7GXH2
    Conserved Domains (2) summary
    cd11299
    Location:97 → 422
    O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
    pfam10250
    Location:100 → 423
    O-FucT; GDP-fucose protein O-fucosyltransferase
Nucleotide Protein
Heading Accession and Version

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