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LOC101263085 monogalactosyldiacylglycerol synthase 2, chloroplastic [ Solanum lycopersicum (tomato) ]

Gene ID: 101263085, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101263085
Gene description
monogalactosyldiacylglycerol synthase 2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101263085 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 12 NC_015449.3 (3016069..3020662, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 12 NC_015449.2 (3016029..3020625, complement)

Chromosome 12 - NC_015449.3Genomic Context describing neighboring genes Neighboring gene bifunctional purple acid phosphatase 26 Neighboring gene UDP-N-acetylglucosamine transferase subunit ALG13 homolog Neighboring gene uncharacterized LOC101263380 Neighboring gene pyrophosphate-energized vacuolar membrane proton pump-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
monogalactosyldiacylglycerol synthase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015449.3 Reference SL3.0 Primary Assembly

    Range
    3016069..3020662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019211640.2 → XP_019067185.1  monogalactosyldiacylglycerol synthase 2, chloroplastic isoform X1

  2. XM_004251687.4 → XP_004251735.1  monogalactosyldiacylglycerol synthase 2, chloroplastic isoform X2

    UniProtKB/TrEMBL
    A0A3Q7J437
    Conserved Domains (3) summary
    PLN02605
    Location:58 → 437
    PLN02605; monogalactosyldiacylglycerol synthase
    pfam06925
    Location:69 → 237
    MGDG_synth; Monogalactosyldiacylglycerol (MGDG) synthase
    cl10013
    Location:201 → 428
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
Heading Accession and Version

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