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LOC101263017 putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 [ Solanum lycopersicum (tomato) ]

Gene ID: 101263017, updated on 1-Nov-2024

Summary

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Gene symbol
LOC101263017
Gene description
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101263017 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 4 NC_090803.1 (57461074..57466193, complement)
103 previous assembly SL3.0 (GCF_000188115.4) 4 NC_015441.3 (55948600..55953655, complement)

Chromosome 4 - NC_090803.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104647123 Neighboring gene uncharacterized LOC138348204 Neighboring gene zinc finger CCCH domain-containing protein 38 Neighboring gene uncharacterized protein At2g24330

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLM_r2.1 Primary Assembly

Genomic

  1. NC_090803.1 Reference SLM_r2.1 Primary Assembly

    Range
    57461074..57466193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004237688.5 → XP_004237736.1  putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3

    UniProtKB/TrEMBL
    A0A3Q7G3E5
    Conserved Domains (2) summary
    cd02537
    Location:316 → 561
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
    COG1442
    Location:391 → 568
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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