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LOC101260885 uncharacterized LOC101260885 [ Solanum lycopersicum (tomato) ]

Gene ID: 101260885, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101260885
Gene description
uncharacterized LOC101260885
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101260885 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 2 NC_015439.3 (54936347..54939462, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 2 NC_015439.2 (54299105..54302229, complement)

Chromosome 2 - NC_015439.3Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene SUPPRESSOR OF GAMMA RESPONSE 1 Neighboring gene glucuronokinase 1 Neighboring gene uncharacterized LOC101260287

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC101260885

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015439.3 Reference SL3.0 Primary Assembly

    Range
    54936347..54939462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010317656.1 → XP_010315958.1  uncharacterized protein LOC101260885 isoform X2

    Conserved Domains (1) summary
    pfam04724
    Location:38 → 385
    Glyco_transf_17; Glycosyltransferase family 17

  2. XM_004231793.4 → XP_004231841.1  uncharacterized protein LOC101260885 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7FBX0
    Conserved Domains (1) summary
    pfam04724
    Location:39 → 386
    Glyco_transf_17; Glycosyltransferase family 17

RNA

  1. XR_003245790.1 RNA Sequence

  2. XR_739496.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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