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LOC101258756 sterol 3-beta-glucosyltransferase UGT80A2 [ Solanum lycopersicum (tomato) ]

Gene ID: 101258756, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101258756
Gene description
sterol 3-beta-glucosyltransferase UGT80A2
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101258756 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 6 NC_015443.3 (1833714..1843689)
102 previous assembly SL2.50 (GCF_000188115.3) 6 NC_015443.2 (1835092..1845061)

Chromosome 6 - NC_015443.3Genomic Context describing neighboring genes Neighboring gene caffeic acid 3-O-methyltransferase Neighboring gene protein SULFUR DEFICIENCY-INDUCED 1-like Neighboring gene uncharacterized LOC101259250 Neighboring gene glycine-rich protein 23-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tomato UDP-Glucose Sterol Glycosyltransferases: A Family of Developmental and Stress Regulated Genes that Encode Cytosolic and Membrane-Associated Forms of the Enzyme. Ramirez-Estrada K, et al. Front Plant Sci, 2017. PMID 28649260, Free PMC Article
  2. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol 3-beta-glucosyltransferase UGT80A2
Names
UDP-glucose:sterol glucosyltransferase SGT1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015443.3 Reference SL3.0 Primary Assembly

    Range
    1833714..1843689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004240415.3 → XP_004240463.1  sterol 3-beta-glucosyltransferase UGT80A2 isoform X2

    UniProtKB/TrEMBL
    K4C3H8
    Conserved Domains (1) summary
    cd03784
    Location:182 → 595
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...

  2. XM_004240414.4 → XP_004240462.1  sterol 3-beta-glucosyltransferase UGT80A2 isoform X1

    See identical proteins and their annotated locations for XP_004240462.1

    UniProtKB/TrEMBL
    A0A3Q7HJ64
    Conserved Domains (2) summary
    cd03784
    Location:196 → 609
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:195 → 619
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]

  3. XM_010323501.3 → XP_010321803.1  sterol 3-beta-glucosyltransferase UGT80A2 isoform X1

    See identical proteins and their annotated locations for XP_010321803.1

    UniProtKB/TrEMBL
    A0A3Q7HJ64
    Conserved Domains (2) summary
    cd03784
    Location:196 → 609
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:195 → 619
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]
Nucleotide Protein
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