U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101257328 mitochondrial arginine transporter BAC1 [ Solanum lycopersicum (tomato) ]

Gene ID: 101257328, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101257328
Gene description
mitochondrial arginine transporter BAC1
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC101257328 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 2 NC_015439.3 (43306048..43308764)
102 previous assembly SL2.50 (GCF_000188115.3) 2 NC_015439.2 (42738302..42741011)

Chromosome 2 - NC_015439.3Genomic Context describing neighboring genes Neighboring gene putative E3 ubiquitin-protein ligase RING1a Neighboring gene peroxisomal leader peptide-processing protease Neighboring gene SQUAMOSA promoter binding protein-like Neighboring gene uncharacterized LOC109119491

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. Aoki K, et al. BMC Genomics, 2010 Mar 30. PMID 20350329, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial arginine transporter BAC1
Names
mitochondrial amino acid carrier

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015439.3 Reference SL3.0 Primary Assembly

    Range
    43306048..43308764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010318464.3 → XP_010316766.1  mitochondrial arginine transporter BAC1 isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:7 → 96
    Mito_carr; Mitochondrial carrier protein

  2. XM_010318463.3 → XP_010316765.1  mitochondrial arginine transporter BAC1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q7F3U3
    Conserved Domains (1) summary
    pfam00153
    Location:7 → 96
    Mito_carr; Mitochondrial carrier protein

  3. XM_004232856.4 → XP_004232904.1  mitochondrial arginine transporter BAC1 isoform X2

    UniProtKB/TrEMBL
    Q0PY36
    Conserved Domains (1) summary
    pfam00153
    Location:7 → 96
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases