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LOC101257106 galacturonosyltransferase 8 [ Solanum lycopersicum (tomato) ]

Gene ID: 101257106, updated on 9-Nov-2023

Summary

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Gene symbol
LOC101257106
Gene description
galacturonosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101257106 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 9 NC_015446.3 (54461713..54466013, complement)
102 previous assembly SL2.50 (GCF_000188115.3) 9 NC_015446.2 (54230993..54235142, complement)

Chromosome 9 - NC_015446.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112942117 Neighboring gene putative G3BP-like protein Neighboring gene uncharacterized LOC104649233 Neighboring gene uncharacterized LOC101257701

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015446.3 Reference SL3.0 Primary Assembly

    Range
    54461713..54466013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010328182.2 → XP_010326484.1  LOW QUALITY PROTEIN: galacturonosyltransferase 8

    Conserved Domains (1) summary
    cd06429
    Location:173 → 467
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases