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LOC101256724 probable galacturonosyltransferase 3 [ Solanum lycopersicum (tomato) ]

Gene ID: 101256724, updated on 1-Nov-2024

Summary

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Gene symbol
LOC101256724
Gene description
probable galacturonosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101256724 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 1 NC_090800.1 (94360359..94365931, complement)
103 previous assembly SL3.0 (GCF_000188115.4) 1 NC_015438.3 (98173949..98179254, complement)

Chromosome 1 - NC_090800.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101256042 Neighboring gene protein NLP2 Neighboring gene pentatricopeptide repeat-containing protein At2g17210 Neighboring gene probable serine/threonine-protein kinase PIX13 Neighboring gene metallothionein-like protein 4B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLM_r2.1 Primary Assembly

Genomic

  1. NC_090800.1 Reference SLM_r2.1 Primary Assembly

    Range
    94360359..94365931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004231049.5 → XP_004231097.1  probable galacturonosyltransferase 3

    UniProtKB/TrEMBL
    A0A3Q7EWF8
    Conserved Domains (2) summary
    cd06429
    Location:366 → 663
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02910
    Location:41 → 677
    PLN02910; polygalacturonate 4-alpha-galacturonosyltransferase
Nucleotide Protein
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