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ACAT2 acetyl-CoA C-acetyltranferase 2 [ Solanum lycopersicum (tomato) ]

Gene ID: 101256172, updated on 9-Nov-2023

Summary

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Gene symbol
ACAT2
Gene description
acetyl-CoA C-acetyltranferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See ACAT2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current SL3.0 (GCF_000188115.4) 4 NC_015441.3 (5276751..5282080)
102 previous assembly SL2.50 (GCF_000188115.3) 4 NC_015441.2 (5276514..5281826)

Chromosome 4 - NC_015441.3Genomic Context describing neighboring genes Neighboring gene protein C2-DOMAIN ABA-RELATED 11-like Neighboring gene DNA oxidative demethylase ALKBH2 Neighboring gene dnaJ homolog subfamily C member 17-like Neighboring gene WEB family protein At1g12150-like Neighboring gene U-box domain-containing protein 36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. JRE4 is a master transcriptional regulator of defense-related steroidal glycoalkaloids in tomato. Nakayasu M, et al. Plant J, 2018 Jun. PMID 29569783

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA C-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable acetyl-CoA acetyltransferase, cytosolic 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum lycopersicum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SL3.0 Primary Assembly

Genomic

  1. NC_015441.3 Reference SL3.0 Primary Assembly

    Range
    5276751..5282080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004236602.4 → XP_004236650.1  probable acetyl-CoA acetyltransferase, cytosolic 2

    UniProtKB/TrEMBL
    A0A3Q7FY19
    Conserved Domains (2) summary
    PLN02644
    Location:13 → 405
    PLN02644; acetyl-CoA C-acetyltransferase
    cd00751
    Location:16 → 402
    thiolase; Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and ...
Nucleotide Protein
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