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LOC101255062 alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like [ Solanum lycopersicum (tomato) ]

Gene ID: 101255062, updated on 1-Nov-2024

Summary

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Gene symbol
LOC101255062
Gene description
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101255062 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 2 NC_090801.1 (57192268..57210670, complement)
103 previous assembly SL3.0 (GCF_000188115.4) 2 NC_015439.3 (41554501..41572906, complement)

Chromosome 2 - NC_090801.1Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease SBT5.6 Neighboring gene pentatricopeptide repeat-containing protein At4g18975, chloroplastic Neighboring gene subtilisin-like protease SBT5.6 Neighboring gene uncharacterized LOC104645878 Neighboring gene GDSL esterase/lipase At5g45670

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables trehalose-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLM_r2.1 Primary Assembly

Genomic

  1. NC_090801.1 Reference SLM_r2.1 Primary Assembly

    Range
    57192268..57210670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010318582.4 → XP_010316884.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like

    UniProtKB/TrEMBL
    K4B8D5
    Conserved Domains (3) summary
    cd03788
    Location:109 → 574
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PLN03064
    Location:44 → 942
    PLN03064; alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
    pfam02358
    Location:619 → 826
    Trehalose_PPase; Trehalose-phosphatase
Nucleotide Protein
Heading Accession and Version

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