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LOC101253423 dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase [ Solanum lycopersicum (tomato) ]

Gene ID: 101253423, updated on 1-Nov-2024

Summary

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Gene symbol
LOC101253423
Gene description
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum lycopersicum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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Genomic context

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See LOC101253423 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 1 NC_090800.1 (79372892..79389091, complement)
103 previous assembly SL3.0 (GCF_000188115.4) 1 NC_015438.3 (83477489..83493686, complement)

Chromosome 1 - NC_090800.1Genomic Context describing neighboring genes Neighboring gene PRA1 family protein D Neighboring gene uncharacterized LOC112941696 Neighboring gene flotillin-like protein 6 Neighboring gene bax inhibitor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SLM_r2.1 Primary Assembly

Genomic

  1. NC_090800.1 Reference SLM_r2.1 Primary Assembly

    Range
    79372892..79389091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026031531.1 → XP_025887316.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

    Conserved Domains (1) summary
    cl21590
    Location:16 → 383
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_026031533.2 → XP_025887318.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2

    Conserved Domains (1) summary
    cl21590
    Location:12 → 298
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

RNA

  1. XR_011210801.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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