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LOC101222165 mitochondrial arginine transporter BAC2 [ Cucumis sativus (cucumber) ]

Gene ID: 101222165, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101222165
Gene description
mitochondrial arginine transporter BAC2
Locus tag
Csa_016704
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101222165 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 7 NC_026661.2 (20987276..20988828)
101 previous assembly ASM407v2 (GCF_000004075.2) 7 NC_026661.1 (17748247..17749582)

Chromosome 7 - NC_026661.2Genomic Context describing neighboring genes Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase CES101 Neighboring gene pentatricopeptide repeat-containing protein At4g21065 Neighboring gene uncharacterized LOC116404947 Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene kinesin-like protein KIN-13B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-Seq improves annotation of protein-coding genes in the cucumber genome. Li Z, et al. BMC Genomics, 2011 Nov 2. PMID 22047402, Free PMC Article
  2. Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types. Guo S, et al. BMC Genomics, 2010 Jun 17. PMID 20565788, Free PMC Article
  3. The genome of the cucumber, Cucumis sativus L. Huang S, et al. Nat Genet, 2009 Dec. PMID 19881527
  4. An integrated genetic and cytogenetic map of the cucumber genome. Ren Y, et al. PLoS One, 2009 Jun 4. PMID 19495411, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026661.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    20987276..20988828
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004141727.3 → XP_004141775.2  mitochondrial arginine transporter BAC2

    See identical proteins and their annotated locations for XP_004141775.2

    UniProtKB/TrEMBL
    A0A0A0K7B8
    Conserved Domains (1) summary
    pfam00153
    Location:213 → 308
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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