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LOC101220431 protein ACCELERATED CELL DEATH 6 [ Cucumis sativus (cucumber) ]

Gene ID: 101220431, updated on 18-Sep-2024

Summary

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Gene symbol
LOC101220431
Gene description
protein ACCELERATED CELL DEATH 6
Locus tag
Csa_019306
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101220431 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 2 NC_026656.2 (2013592..2017504, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 2 NC_026656.1 (1874865..1878794, complement)

Chromosome 2 - NC_026656.2Genomic Context describing neighboring genes Neighboring gene GRF1-interacting factor 1 Neighboring gene myosin-binding protein 1 Neighboring gene uncharacterized LOC116402257 Neighboring gene protein ACCELERATED CELL DEATH 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ACCELERATED CELL DEATH 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026656.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    2013592..2017504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011650438.2 → XP_011648740.1  protein ACCELERATED CELL DEATH 6

    See identical proteins and their annotated locations for XP_011648740.1

    UniProtKB/TrEMBL
    A0A0A0LIB0
    Conserved Domains (4) summary
    PHA02874
    Location:183 → 369
    PHA02874; ankyrin repeat protein; Provisional
    sd00045
    Location:207 → 238
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:211 → 295
    Ank_2; Ankyrin repeats (3 copies)
    pfam13962
    Location:425 → 529
    PGG; Domain of unknown function
Nucleotide Protein
Heading Accession and Version

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