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LOC101211449 pectinesterase 2 [ Cucumis sativus (cucumber) ]

Gene ID: 101211449, updated on 14-Dec-2023

Summary

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Gene symbol
LOC101211449
Gene description
pectinesterase 2
Locus tag
Csa_010597
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC101211449 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 3 NC_026657.2 (12095397..12097747, complement)
101 previous assembly ASM407v2 (GCF_000004075.2) 3 NC_026657.1 (11898952..11901326, complement)

Chromosome 3 - NC_026657.2Genomic Context describing neighboring genes Neighboring gene monocopper oxidase-like protein SKS1 Neighboring gene NAC domain-containing protein 7 Neighboring gene pentatricopeptide repeat-containing protein At5g62370 Neighboring gene uncharacterized LOC101211693 Neighboring gene 21 kDa protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026657.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    12095397..12097747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004148091.3 → XP_004148139.2  pectinesterase 2

    See identical proteins and their annotated locations for XP_004148139.2

    UniProtKB/TrEMBL
    A0A0A0L9G4
    Conserved Domains (1) summary
    PLN02995
    Location:77 → 571
    PLN02995; Probable pectinesterase/pectinesterase inhibitor
Nucleotide Protein
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