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gnl3l G protein nucleolar 3 like [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101166045, updated on 8-Mar-2024

Summary

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Gene symbol
gnl3l
Gene description
G protein nucleolar 3 like
See related
EnsemblRapid:ENSORLG00000014117
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See gnl3l in Genome Data Viewer
Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 5 NC_019863.2 (26405363..26413719)
102 previous assembly ASM31367v1 (GCF_000313675.1) 5 NC_019863.1 (28135703..28143521)

Chromosome 5 - NC_019863.2Genomic Context describing neighboring genes Neighboring gene opsin 1 (cone pigments), long-wave-sensitive, 1 Neighboring gene KFH-R protein Neighboring gene transcription factor binding to IGHM enhancer 3b Neighboring gene uncharacterized LOC105354156 Neighboring gene CXXC finger protein 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein-like 3-like protein
Names
guanine nucleotide binding protein-like 3 (nucleolar)-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019863.2 Reference ASM223467v1 Primary Assembly

    Range
    26405363..26413719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004069095.4 → XP_004069143.1  guanine nucleotide-binding protein-like 3-like protein

    See identical proteins and their annotated locations for XP_004069143.1

    UniProtKB/TrEMBL
    A0A3P9JF91
    Related
    ENSORLP00000067669.1, ENSORLT00000057964.1
    Conserved Domains (3) summary
    cd04178
    Location:125 → 296
    Nucleostemin_like; A circularly permuted subfamily of the Ras GTPases
    TIGR03596
    Location:115 → 389
    GTPase_YlqF; ribosome biogenesis GTP-binding protein YlqF
    pfam01749
    Location:42 → 80
    IBB; Importin beta binding domain
Nucleotide Protein
Heading Accession and Version

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