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med23 mediator complex subunit 23 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101160525, updated on 8-Mar-2024

Summary

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Gene symbol
med23
Gene description
mediator complex subunit 23
See related
EnsemblRapid:ENSORLG00000017103
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See med23 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
31
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 24 NC_019882.2 (15903713..15921824, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 24 NC_019882.1 (15986017..16004251, complement)

Chromosome 24 - NC_019882.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101160281 Neighboring gene A-kinase anchoring protein 7 Neighboring gene interleukin 20 receptor, alpha Neighboring gene EH-domain containing 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019882.2 Reference ASM223467v1 Primary Assembly

    Range
    15903713..15921824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004083736.4 → XP_004083784.2  mediator of RNA polymerase II transcription subunit 23 isoform X2

    UniProtKB/TrEMBL
    H2MRM4
    Related
    ENSORLP00000066783.1, ENSORLT00000071011.1
    Conserved Domains (1) summary
    pfam11573
    Location:8 → 1316
    Med23; Mediator complex subunit 23

  2. XM_004083737.4 → XP_004083785.2  mediator of RNA polymerase II transcription subunit 23 isoform X1

    UniProtKB/TrEMBL
    H2MRM4
    Related
    ENSORLP00000073964.1, ENSORLT00000054684.1
    Conserved Domains (1) summary
    pfam11573
    Location:8 → 1322
    Med23; Mediator complex subunit 23
Nucleotide Protein
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