U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101155793, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
csgalnact2
Gene description
chondroitin sulfate N-acetylgalactosaminyltransferase 2
See related
EnsemblRapid:ENSORLG00000013924
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See csgalnact2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 15 NC_019873.2 (29893861..29901971, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) 15 NC_019873.1 (29365675..29373785, complement)

Chromosome 15 - NC_019873.2Genomic Context describing neighboring genes Neighboring gene BCL2 associated athanogene 3 Neighboring gene inositol polyphosphate-5-phosphatase F Neighboring gene minichromosome maintenance complex binding protein Neighboring gene SEC23 interacting protein Neighboring gene ret proto-oncogene receptor tyrosine kinase Neighboring gene uncharacterized LOC101155794 Neighboring gene pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019873.2 Reference ASM223467v1 Primary Assembly

    Range
    29893861..29901971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011484776.2 → XP_011483078.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    See identical proteins and their annotated locations for XP_011483078.1

    UniProtKB/TrEMBL
    A0A3P9JPK9, H2MFT3, H2MFT5
    Related
    ENSORLP00000080611.1, ENSORLT00000059730.1
    Conserved Domains (1) summary
    cl11394
    Location:66 → 513
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_011484775.2 → XP_011483077.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    See identical proteins and their annotated locations for XP_011483077.1

    UniProtKB/TrEMBL
    A0A3P9JPK9, H2MFT3, H2MFT5
    Related
    ENSORLP00000017460.2, ENSORLT00000017461.3
    Conserved Domains (1) summary
    cl11394
    Location:66 → 513
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.