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CHI3L2 chitinase 3 like 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101148728, updated on 1-Oct-2024

Summary

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Gene symbol
CHI3L2
Gene description
chitinase 3 like 2
See related
Ensembl:ENSGGOG00000016018 Ensembl:ENSGGOG00000039363
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human all
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Genomic context

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See CHI3L2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 1 NC_073224.2 (127657715..127674257, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 1 NC_073224.1 (118346216..118362742)

Chromosome 1 - NC_073224.2Genomic Context describing neighboring genes Neighboring gene chitinase acidic Neighboring gene acidic mammalian chitinase-like Neighboring gene DENN domain containing 2D Neighboring gene choline/ethanolamine phosphotransferase 1 Neighboring gene DNA damage regulated autophagy modulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitinase-3-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073224.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    127657715..127674257 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004026328.5 → XP_004026377.1  chitinase-3-like protein 2

    UniProtKB/TrEMBL
    A0A2I2Z9V1, G3RIW0
    Related
    ENSGGOP00000015627.2
    Conserved Domains (1) summary
    cd02872
    Location:29 → 387
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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