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ABAT 4-aminobutyrate aminotransferase [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101148531, updated on 10-Oct-2024

Summary

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Gene symbol
ABAT
Gene description
4-aminobutyrate aminotransferase
See related
Ensembl:ENSGGOG00000010108
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See ABAT in Genome Data Viewer
Location:
chromosome: 18
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 18 NC_073242.2 (12306429..12427183)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 16 NC_073240.1 (13350678..13471442)

Chromosome 18 - NC_073242.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 114 Neighboring gene methyltransferase 22, Kin17 lysine Neighboring gene U7 small nuclear RNA Neighboring gene transmembrane protein 186 Neighboring gene phosphomannomutase 2 Neighboring gene calcium regulated heat stable protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyric acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-aminobutyrate aminotransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073242.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    12306429..12427183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055365266.2 → XP_055221241.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3R3N6

  2. XM_004057171.5 → XP_004057219.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_004057219.1

    UniProtKB/TrEMBL
    A0A2I2YNK8, G3R3N6
    Conserved Domains (1) summary
    TIGR00699
    Location:34 → 496
    GABAtrns_euk; 4-aminobutyrate aminotransferase, eukaryotic type

  3. XM_055365267.2 → XP_055221242.1  4-aminobutyrate aminotransferase, mitochondrial isoform X3

  4. XM_063699984.1 → XP_063556054.1  4-aminobutyrate aminotransferase, mitochondrial isoform X1

  5. XM_063699985.1 → XP_063556055.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3R3N6

  6. XM_063699986.1 → XP_063556056.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3R3N6

  7. XM_063699987.1 → XP_063556057.1  4-aminobutyrate aminotransferase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    G3R3N6
Nucleotide Protein
Heading Accession and Version

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