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GPLD1 glycosylphosphatidylinositol specific phospholipase D1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101146393, updated on 1-Oct-2024

Summary

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Gene symbol
GPLD1
Gene description
glycosylphosphatidylinositol specific phospholipase D1
See related
Ensembl:ENSGGOG00000009108
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See GPLD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 5 NC_073229.2 (42141113..42203122, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 6 NC_073230.1 (41931569..41996154, complement)

Chromosome 5 - NC_073229.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129534264 Neighboring gene magnesium transporter MRS2 Neighboring gene aldehyde dehydrogenase 5 family member A1 Neighboring gene KIAA0319 ortholog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosylphosphatidylinositol phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor release IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan-specific phospholipase D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073229.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    42141113..42203122 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004043340.5 → XP_004043388.1  phosphatidylinositol-glycan-specific phospholipase D isoform X1

    UniProtKB/TrEMBL
    A0A2I2YDH8, G3R160
    Related
    ENSGGOP00000032865.1
    Conserved Domains (3) summary
    smart00191
    Location:446 → 502
    Int_alpha; Integrin alpha (beta-propellor repeats)
    pfam01839
    Location:514 → 541
    FG-GAP; FG-GAP repeat
    pfam00882
    Location:28 → 211
    Zn_dep_PLPC; Zinc dependent phospholipase C

  2. XM_055390355.2 → XP_055246330.1  phosphatidylinositol-glycan-specific phospholipase D isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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