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LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101145692, updated on 1-Oct-2024

Summary

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Gene symbol
LFNG
Gene description
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSGGOG00000003639
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See LFNG in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 6 NC_073230.2 (9986238..9994954)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 7 NC_073231.1 (9989092..9997801)

Chromosome 6 - NC_073230.2Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 12 Neighboring gene galectin-related inter-fiber protein Neighboring gene small nucleolar RNA U13 Neighboring gene BRCA1 associated ATM activator 1 Neighboring gene IQ motif containing E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pattern specification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073230.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    9986238..9994954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055346796.2 → XP_055202771.1  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X2

  2. XM_031013478.3 → XP_030869338.2  beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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