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POMT2 protein O-mannosyltransferase 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101140993, updated on 10-Oct-2024

Summary

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Gene symbol
POMT2
Gene description
protein O-mannosyltransferase 2
See related
Ensembl:ENSGGOG00000006199
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See POMT2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 15 NC_073239.2 (94133910..94179821, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 14 NC_073238.1 (85960278..86006145, complement)

Chromosome 15 - NC_073239.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 63C Neighboring gene neuroglobin Neighboring gene glutathione S-transferase zeta 1 Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene broad substrate specificity ATP-binding cassette transporter ABCG2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073239.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    94133910..94179821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055361074.2 → XP_055217049.2  protein O-mannosyl-transferase 2 isoform X7

  2. XM_055361070.2 → XP_055217045.2  protein O-mannosyl-transferase 2 isoform X4

  3. XM_055361072.2 → XP_055217047.1  protein O-mannosyl-transferase 2 isoform X5

  4. XM_055361069.2 → XP_055217044.2  protein O-mannosyl-transferase 2 isoform X1

  5. XM_004055495.5 → XP_004055543.1  protein O-mannosyl-transferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I2YLI9, G3QTP2
    Related
    ENSGGOP00000006071.2
    Conserved Domains (1) summary
    COG1928
    Location:50 → 750
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

  6. XM_063698054.1 → XP_063554124.1  protein O-mannosyl-transferase 2 isoform X3

  7. XM_055361073.2 → XP_055217048.1  protein O-mannosyl-transferase 2 isoform X6

RNA

  1. XR_008671213.2 RNA Sequence

  2. XR_002002609.3 RNA Sequence

Nucleotide Protein
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