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SGMS1 sphingomyelin synthase 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101138874, updated on 1-Oct-2024

Summary

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Gene symbol
SGMS1
Gene description
sphingomyelin synthase 1
See related
Ensembl:ENSGGOG00000006170
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See SGMS1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 8 NC_073232.2 (65169157..65482922)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 10 NC_073234.1 (65243733..65557582)

Chromosome 8 - NC_073232.2Genomic Context describing neighboring genes Neighboring gene BEN domain-containing protein 3-like Neighboring gene protein SHQ1 homolog Neighboring gene putative inactive neutral ceramidase B Neighboring gene ribosome biogenesis protein BMS1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingomyelin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingomyelin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylcholine:ceramide cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073232.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    65169157..65482922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019035024.4 → XP_018890569.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    G3QTK8
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:276 → 349
    PAP2_C; PAP2 superfamily C-terminal

  2. XM_019035025.4 → XP_018890570.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    G3QTK8
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:276 → 349
    PAP2_C; PAP2 superfamily C-terminal

  3. XM_004049419.5 → XP_004049467.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_004049467.1

    UniProtKB/TrEMBL
    G3QTK8
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:276 → 349
    PAP2_C; PAP2 superfamily C-terminal

  4. XM_063709740.1 → XP_063565810.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    G3QTK8

  5. XM_055354065.2 → XP_055210040.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    G3QTK8

  6. XM_031015365.3 → XP_030871225.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    G3QTK8
    Conserved Domains (2) summary
    cd09514
    Location:1 → 72
    SAM_SGMS1; SAM domain of sphingomyelin synthase
    pfam14360
    Location:276 → 349
    PAP2_C; PAP2 superfamily C-terminal

  7. XM_063709741.1 → XP_063565811.1  phosphatidylcholine:ceramide cholinephosphotransferase 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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