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SLC35C1 solute carrier family 35 member C1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101137889, updated on 1-Oct-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
See related
Ensembl:ENSGGOG00000001327
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 9 NC_073233.2 (52168426..52177434)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 11 NC_073235.1 (55532394..55541351)

Chromosome 9 - NC_073233.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129525287 Neighboring gene uncharacterized LOC101137509 Neighboring gene uncharacterized LOC129525288 Neighboring gene cryptochrome circadian regulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-fucose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073233.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    52168426..52177434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004050995.5 → XP_004051043.1  GDP-fucose transporter 1 isoform X2

    See identical proteins and their annotated locations for XP_004051043.1

    Conserved Domains (1) summary
    cl26744
    Location:26 → 290
    TPT; Triose-phosphate Transporter family

  2. XM_004050994.5 → XP_004051042.1  GDP-fucose transporter 1 isoform X2

    See identical proteins and their annotated locations for XP_004051042.1

    Conserved Domains (1) summary
    cl26744
    Location:26 → 290
    TPT; Triose-phosphate Transporter family

  3. XM_004050993.5 → XP_004051041.1  GDP-fucose transporter 1 isoform X1

    UniProtKB/TrEMBL
    G3QG59
    Related
    ENSGGOP00000001311.2
    Conserved Domains (1) summary
    cl26744
    Location:39 → 303
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
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