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PAIP1 poly(A) binding protein interacting protein 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101136837, updated on 1-Oct-2024

Summary

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Gene symbol
PAIP1
Gene description
poly(A) binding protein interacting protein 1
See related
Ensembl:ENSGGOG00000022753
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See PAIP1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 19 NC_073243.2 (68348392..68379954)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 17 NC_073241.1 (63939192..63971494)

Chromosome 19 - NC_073243.2Genomic Context describing neighboring genes Neighboring gene nicotinamide nucleotide transhydrogenase Neighboring gene large ribosomal subunit protein eL29-like Neighboring gene S-adenosylmethionine decarboxylase proenzyme-like Neighboring gene uncharacterized LOC129528042 Neighboring gene chromosome 19 C5orf34 homolog Neighboring gene elongation factor 1-alpha 1-like Neighboring gene transmembrane protein 267

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073243.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    68348392..68379954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004058885.5 → XP_004058933.1  polyadenylate-binding protein-interacting protein 1 isoform X3

    See identical proteins and their annotated locations for XP_004058933.1

    UniProtKB/TrEMBL
    A0A2I2ZEW2, G3SHC4
    Related
    ENSGGOP00000027512.2
    Conserved Domains (2) summary
    pfam07145
    Location:12 → 28
    PAM2; Ataxin-2 C-terminal region
    pfam02854
    Location:48 → 264
    MIF4G; MIF4G domain

  2. XM_004058884.5 → XP_004058932.1  polyadenylate-binding protein-interacting protein 1 isoform X2

    See identical proteins and their annotated locations for XP_004058932.1

    UniProtKB/TrEMBL
    A0A2I2ZEW2
    Related
    ENSGGOP00000045815.1
    Conserved Domains (2) summary
    pfam07145
    Location:45 → 61
    PAM2; Ataxin-2 C-terminal region
    pfam02854
    Location:81 → 297
    MIF4G; MIF4G domain

  3. XM_004058883.5 → XP_004058931.1  polyadenylate-binding protein-interacting protein 1 isoform X1

    See identical proteins and their annotated locations for XP_004058931.1

    Conserved Domains (2) summary
    PRK14951
    Location:35 → 123
    PRK14951; DNA polymerase III subunits gamma and tau; Provisional
    pfam02854
    Location:160 → 376
    MIF4G; MIF4G domain
Nucleotide Protein
Heading Accession and Version

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