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ACER3 alkaline ceramidase 3 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101135483, updated on 10-Oct-2024

Summary

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Gene symbol
ACER3
Gene description
alkaline ceramidase 3
See related
Ensembl:ENSGGOG00000003818
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See ACER3 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 9 NC_073233.2 (84750396..84918093)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 11 NC_073235.1 (86927155..87094772)

Chromosome 9 - NC_073233.2Genomic Context describing neighboring genes Neighboring gene guanylate cyclase D-like Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene calpain 5 Neighboring gene olfactory marker protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073233.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    84750396..84918093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031016240.3 → XP_030872100.1  alkaline ceramidase 3 isoform X1

    UniProtKB/TrEMBL
    A0A2I2Y3F2
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 259
    Ceramidase

  2. XM_055356856.2 → XP_055212831.1  alkaline ceramidase 3 isoform X3

  3. XM_055356855.2 → XP_055212830.1  alkaline ceramidase 3 isoform X2

  4. XM_063693400.1 → XP_063549470.1  alkaline ceramidase 3 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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