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GPC1 glypican 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101134430, updated on 6-Jun-2024

Summary

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Gene symbol
GPC1
Gene description
glypican 1
See related
Ensembl:ENSGGOG00000001475
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See GPC1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 11 NC_073235.2 (143094330..143127082)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 2B NC_073226.1 (131571177..131603670)

Chromosome 11 - NC_073235.2Genomic Context describing neighboring genes Neighboring gene otospiralin Neighboring gene small nucleolar RNA U3 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene microRNA mir-149 Neighboring gene ankyrin repeat and MYND domain containing 1 Neighboring gene dual specificity phosphatase 28 Neighboring gene arginyl aminopeptidase like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibroblast growth factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073235.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    143094330..143127082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031008619.3 → XP_030864479.2  glypican-1 isoform X1

    UniProtKB/TrEMBL
    A0A2I2Y6K0

  2. XM_019022549.4 → XP_018878094.3  glypican-1 isoform X2

    UniProtKB/TrEMBL
    A0A2I2YFE4, G3QGJ9
Nucleotide Protein
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Gene LinkOut

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