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TGIF1 TGFB induced factor homeobox 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101129540, updated on 1-Oct-2024

Summary

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Gene symbol
TGIF1
Gene description
TGFB induced factor homeobox 1
See related
Ensembl:ENSGGOG00000012694
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See TGIF1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 17 NC_073241.2 (46831884..46842745, complement)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 18 NC_073242.1 (39263005..39273866, complement)

Chromosome 17 - NC_073241.2Genomic Context describing neighboring genes Neighboring gene DLG associated protein 1 Neighboring gene small nucleolar RNA U13 Neighboring gene small ribosomal subunit protein uS2-like Neighboring gene small nucleolar RNA U13 Neighboring gene immunoglobulin lambda constant 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein TGIF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073241.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    46831884..46842745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031003754.2 → XP_030859614.1  homeobox protein TGIF1 isoform X2

    UniProtKB/TrEMBL
    A0A2I2ZAE1
    Conserved Domains (1) summary
    pfam05920
    Location:67 → 106
    Homeobox_KN; Homeobox KN domain

  2. XM_063699433.1 → XP_063555503.1  homeobox protein TGIF1 isoform X4

    UniProtKB/TrEMBL
    G3RAB7

  3. XM_031003760.3 → XP_030859620.1  homeobox protein TGIF1 isoform X5

    Conserved Domains (1) summary
    pfam05920
    Location:33 → 72
    Homeobox_KN; Homeobox KN domain

  4. XM_031003757.3 → XP_030859617.1  homeobox protein TGIF1 isoform X5

    Conserved Domains (1) summary
    pfam05920
    Location:33 → 72
    Homeobox_KN; Homeobox KN domain

  5. XM_055368517.1 → XP_055224492.1  homeobox protein TGIF1 isoform X3

  6. XM_031003755.3 → XP_030859615.1  homeobox protein TGIF1 isoform X4

    UniProtKB/TrEMBL
    G3RAB7
    Conserved Domains (1) summary
    pfam05920
    Location:53 → 92
    Homeobox_KN; Homeobox KN domain

  7. XM_004059143.5 → XP_004059191.3  homeobox protein TGIF1 isoform X1

    UniProtKB/TrEMBL
    A0A2I2YD71
    Conserved Domains (1) summary
    pfam05920
    Location:182 → 221
    Homeobox_KN; Homeobox KN domain

  8. XM_031003762.3 → XP_030859622.1  homeobox protein TGIF1 isoform X5

    Conserved Domains (1) summary
    pfam05920
    Location:33 → 72
    Homeobox_KN; Homeobox KN domain
Nucleotide Protein
Heading Accession and Version

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