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ICAM1 intercellular adhesion molecule 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101127502, updated on 1-Oct-2024

Summary

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Gene symbol
ICAM1
Gene description
intercellular adhesion molecule 1
See related
Ensembl:ENSGGOG00000005980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Also known as
ICAM-1
Orthologs
human mouse all
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Genomic context

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See ICAM1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 20 NC_073244.2 (16307745..16322513)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 19 NC_073243.1 (16300767..16315535)

Chromosome 20 - NC_073244.2Genomic Context describing neighboring genes Neighboring gene sphingosine-1-phosphate receptor 2 Neighboring gene mitochondrial ribosomal protein L4 Neighboring gene intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) Neighboring gene intercellular adhesion molecule 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The potential significance of adaptive evolution and dimerization in chimpanzee intercellular cell adhesion molecules (ICAMs). Walter NA, et al. J Theor Biol, 2005 Feb 7. PMID 15572059
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intercellular adhesion molecule 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001279603.1 → NP_001266532.1  intercellular adhesion molecule 1 precursor

    See identical proteins and their annotated locations for NP_001266532.1

    Status: PROVISIONAL

    Source sequence(s)
    AF340037
    UniProtKB/Swiss-Prot
    Q5NKV9
    UniProtKB/TrEMBL
    A0A2K5TIZ4
    Related
    ENSGGOP00000038077.1, ENSGGOT00000064956.1
    Conserved Domains (4) summary
    smart00410
    Location:404 → 474
    IG_like; Immunoglobulin like
    pfam03921
    Location:24 → 110
    ICAM_N; Intercellular adhesion molecule (ICAM), N-terminal domain
    pfam13895
    Location:419 → 474
    Ig_2; Immunoglobulin domain
    cl11960
    Location:113 → 207
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073244.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    16307745..16322513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5NKV9.1 GenPept UniProtKB/Swiss-Prot:Q5NKV9

Gene LinkOut

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