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NDST1 N-deacetylase and N-sulfotransferase 1 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101127245, updated on 1-Oct-2024

Summary

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Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
See related
Ensembl:ENSGGOG00000013713
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See NDST1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 4 NC_073228.2 (154339572..154412024)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 5 NC_073229.1 (152782098..152854570)

Chromosome 4 - NC_073228.2Genomic Context describing neighboring genes Neighboring gene CD74 molecule Neighboring gene ribosomal protein S14 Neighboring gene small nucleolar RNA U13 Neighboring gene synaptopodin Neighboring gene myozenin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
Names
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073228.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    154339572..154412024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055386216.2 → XP_055242191.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  2. XM_019028026.4 → XP_018883571.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

  3. XM_055386215.2 → XP_055242190.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  4. XM_063706881.1 → XP_063562951.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X4

  5. XM_055386220.2 → XP_055242195.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

  6. XM_055386219.2 → XP_055242194.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X3

  7. XM_063706880.1 → XP_063562950.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X4

  8. XM_055386214.2 → XP_055242189.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  9. XM_019028028.4 → XP_018883573.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

  10. XM_055386217.2 → XP_055242192.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X1

  11. XM_004042824.5 → XP_004042872.2  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 isoform X2

Nucleotide Protein
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