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CHSY3 chondroitin sulfate synthase 3 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101126045, updated on 1-Oct-2024

Summary

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Gene symbol
CHSY3
Gene description
chondroitin sulfate synthase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See CHSY3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 4 NC_073228.2 (133789334..134070523)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 5 NC_073229.1 (132208290..132489456)

Chromosome 4 - NC_073228.2Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 19 Neighboring gene uncharacterized LOC129533442 Neighboring gene membrane integral NOTCH2 associated receptor 2 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene uncharacterized LOC129533444 Neighboring gene U7 small nuclear RNA Neighboring gene ADP-ribosylation factor-like protein 2-binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073228.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    133789334..134070523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019028551.4 → XP_018884096.2  chondroitin sulfate synthase 3

    UniProtKB/TrEMBL
    G3RP27
    Conserved Domains (3) summary
    pfam05679
    Location:329 → 865
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    pfam15240
    Location:54 → 94
    Pro-rich; Proline-rich
    cl21608
    Location:174 → 399
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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