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DHX58 DExH-box helicase 58 [ Gorilla gorilla gorilla (western lowland gorilla) ]

Gene ID: 101125917, updated on 1-Oct-2024

Summary

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Gene symbol
DHX58
Gene description
DExH-box helicase 58
See related
Ensembl:ENSGGOG00000005458
Gene type
protein coding
RefSeq status
MODEL
Organism
Gorilla gorilla gorilla (sub-species: gorilla)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
Orthologs
human mouse all
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Genomic context

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See DHX58 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 4 NC_073228.2 (50356487..50367845)
RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 5 NC_073229.1 (50683277..50694272)

Chromosome 4 - NC_073228.2Genomic Context describing neighboring genes Neighboring gene heat shock protein family B (small) member 9 Neighboring gene lysine acetyltransferase 2A Neighboring gene zinc finger protein 385C Neighboring gene chromosome 4 C17orf113 homolog Neighboring gene NFKB inhibitor interacting Ras like 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member C7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antiviral innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoplasmic pattern recognition receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of RIG-I signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX58

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

Genomic

  1. NC_073228.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Range
    50356487..50367845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019026949.3 → XP_018882494.2  ATP-dependent RNA helicase DHX58 isoform X1

  2. XM_055388114.1 → XP_055244089.1  ATP-dependent RNA helicase DHX58 isoform X1

  3. XM_063706402.1 → XP_063562472.1  ATP-dependent RNA helicase DHX58 isoform X2

  4. XM_004041703.3 → XP_004041751.2  ATP-dependent RNA helicase DHX58 isoform X1

Nucleotide Protein
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